Bagdonava is a village in Jonava District Municipality, in Kaunas County, Lithuania. Bagdonava lies at 76 m above sea level. The nearest city is Jonava, 7.9 km to the east. Among the landmarks around are Ninth Fort (22 km), M. K. Čiurlionis National Art Museum (23 km) and Pažaislis Monastery (21 km).